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05/17/2023
Testing GitHub projects on custom resources using unprivileged Kubernetes runners
GitHub is a popular repository for hosting software projects, both due t...
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07/08/2021
Enabling microbiome research on personal devices
Microbiome studies have recently transitioned from experimental designs ...
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04/19/2021
Accelerating key bioinformatics tasks 100-fold by improving memory access
Most experimental sciences now rely on computing, and biological science...
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01/29/2021
Multi-Block Sparse Functional Principal Components Analysis for Longitudinal Microbiome Multi-Omics Data
Microbiome researchers often need to model the temporal dynamics of mult...
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12/01/2020
BayesTime: Bayesian Functional Principal Components for Sparse Longitudinal Data
Modeling non-linear temporal trajectories is of fundamental interest in ...
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11/30/2020
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data
Feature selection is indispensable in microbiome data analysis, but it c...
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05/12/2020
Porting and optimizing UniFrac for GPUs
UniFrac is a commonly used metric in microbiome research for comparing m...
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10/13/2018