Bermuda Triangles: GNNs Fail to Detect Simple Topological Structures
Most graph neural network architectures work by message-passing node vector embeddings over the adjacency matrix, and it is assumed that they capture graph topology by doing that. We design two synthetic tasks, focusing purely on topological problems – triangle detection and clique distance – on which graph neural networks perform surprisingly badly, failing to detect those "bermuda" triangles. Datasets and their generation scripts are publicly available on github.com/FujitsuLaboratories/bermudatriangles and dataset.labs.fujitsu.com.
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